miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|167694108|gb|FE026223.1|FE026223 AGAAATAAATGAGCAAATTAGAAAAGAGAAAGAGGAAGCTGAGGCTCGTATGCGACAAGCATCTAAGAATGCAGAGAAGT
CAGCTGGCGGAGGTGGAAACGGAAGTAAACATTGGTCAGAAGATGATCTGCAATTACTCATTAAAGCTGTGAATCTCTTC
CCTGCTGGAACAAATTCAAGATGGGAAGTTATTGCTAATTACATGAACATACATTCTTCTTCTGGAGTTAAGAGAACCGC
CAAAGATGTTATCGGCAAAGCAAAGAGCCTTCAAAAACTTGACCCTCATCAAAAGGATGACATAAATAAAAAGGCTTTTG
ATAAATTTAAGAAAGAACATGGCGTGGTGCCTCAGGCAGACAATGCAACACCTTCAGAACGATTTGAAGGTCCATGCACA
GATTTCACCCCTTGGACAACAGAAGAACAGAAGCTTTTGGAACAAGCTTTGAAAACATACCCAGTAAATACACCTGAAAG
ATGGGAAAAAACAGCAGAAGCAGTGCCTGGCAGGACAAAGAAGGACTGCATGAAACGATACAAGGAACTGGTTGAAATGG
TAAAAGCAAAGAAAGCTGCTCAAGAGCAAGTGCTGAATGCAAGTAGAGGCAAGAAATGACTTATGACAATCTTTGTTGTG
TGTGCATTTTTATAATAAAA




Most similar to sp|Q1RMH9|DNJC2_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q1RMH9|DNJC2_BOVIN DnaJ homolog subfamily C member 2 OS=Bos taurus
            GN=DNAJC2 PE=2 SV=1
          Length = 621

 Score =  392 bits (1007), Expect = e-108
 Identities = 194/205 (94%), Positives = 194/205 (94%)
 Frame = +2

Query: 2    EINEQIXXXXXXXXXXMRQASKNAEKSAGGGGNGSKHWSEDDLQLLIKAVNLFPAGTNSR 181
            EINEQI          MRQASKNAEKSAGGGGNGSKHWSEDDLQLLIKAVNLFPAGTNSR
Sbjct: 417  EINEQIRKEKEEAEARMRQASKNAEKSAGGGGNGSKHWSEDDLQLLIKAVNLFPAGTNSR 476

Query: 182  WEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKKAFDKFKKEHGVVPQAD 361
            WEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKKAFDKFKKEHGVVPQAD
Sbjct: 477  WEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKKAFDKFKKEHGVVPQAD 536

Query: 362  NATPSERFEGPCTDFTPWTTEEQKLLEQALKTYPVNTPERWEKTAEAVPGRTKKDCMKRY 541
            NATPSERFEGPCTDFTPWTTEEQKLLEQALKTYPVNTPERWEK AEAVPGRTKKDCMKRY
Sbjct: 537  NATPSERFEGPCTDFTPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRY 596

Query: 542  KELVEMVKAKKAAQEQVLNASRGKK 616
            KELVEMVKAKKAAQEQVLNASRGKK
Sbjct: 597  KELVEMVKAKKAAQEQVLNASRGKK 621